From e2c06d2681e18946ab6c3e3e6075aed92a4d13be Mon Sep 17 00:00:00 2001
From: Karl Hallsby <karl@hallsby.com>
Date: Sun, 3 Oct 2021 00:35:46 -0500
Subject: Change to al-folio theme

Theme at: https://github.com/alshedivat/al-folio
---
 _includes/footer.html              | 27 +++++++++++
 _includes/head.html                | 74 ++++++++++++++++++++++++++++++
 _includes/header.html              | 92 ++++++++++++++++++++++++++++++++++++++
 _includes/news.html                | 24 ++++++++++
 _includes/pagination.html          | 17 +++++++
 _includes/projects.html            | 32 +++++++++++++
 _includes/projects_horizontal.html | 40 +++++++++++++++++
 _includes/scripts/bootstrap.html   |  4 ++
 _includes/scripts/jquery.html      |  2 +
 _includes/scripts/mansory.html     |  6 +++
 _includes/scripts/mathjax.html     | 12 +++++
 _includes/scripts/misc.html        | 15 +++++++
 _includes/selected_papers.html     |  4 ++
 _includes/social.html              | 17 +++++++
 14 files changed, 366 insertions(+)
 create mode 100644 _includes/footer.html
 create mode 100644 _includes/head.html
 create mode 100644 _includes/header.html
 create mode 100644 _includes/news.html
 create mode 100644 _includes/pagination.html
 create mode 100644 _includes/projects.html
 create mode 100644 _includes/projects_horizontal.html
 create mode 100644 _includes/scripts/bootstrap.html
 create mode 100644 _includes/scripts/jquery.html
 create mode 100644 _includes/scripts/mansory.html
 create mode 100644 _includes/scripts/mathjax.html
 create mode 100644 _includes/scripts/misc.html
 create mode 100644 _includes/selected_papers.html
 create mode 100644 _includes/social.html

(limited to '_includes')

diff --git a/_includes/footer.html b/_includes/footer.html
new file mode 100644
index 0000000..2e34521
--- /dev/null
+++ b/_includes/footer.html
@@ -0,0 +1,27 @@
+{% if site.footer_fixed %}
+<footer class="fixed-bottom">
+  <div class="container mt-0">
+    &copy; Copyright {{ site.time | date: '%Y' }} {{ site.first_name }} {{ site.middle_name }} {{ site.last_name }}.
+    {{ site.footer_text }}
+    {% if site.impressum_path %}
+    <a href="{{ site.url }}{{ site.baseurl }}{{ site.impressum_path }}">Impressum</a>.
+    {% endif %}
+    {% if site.last_updated %}
+    Last updated: {{ "now" | date: '%B %d, %Y' }}.
+    {% endif %}
+  </div>
+</footer>
+{% else %}
+<footer class="sticky-bottom mt-5">
+  <div class="container">
+    &copy; Copyright {{ site.time | date: '%Y' }} {{ site.first_name }} {{ site.middle_name }} {{ site.last_name }}.
+    {{ site.footer_text }}
+    {% if site.impressum_path %}
+    <a href="{{ site.url }}{{ site.baseurl }}{{ site.impressum_path }}">Impressum</a>.
+    {% endif %}
+    {% if site.last_updated %}
+    Last updated: {{ "now" | date: '%B %d, %Y' }}.
+    {% endif %}
+  </div>
+</footer>
+{% endif %}
diff --git a/_includes/head.html b/_includes/head.html
new file mode 100644
index 0000000..c629888
--- /dev/null
+++ b/_includes/head.html
@@ -0,0 +1,74 @@
+<meta charset="utf-8">
+<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
+<meta http-equiv="X-UA-Compatible" content="IE=edge">
+
+<title>
+{% if site.title == "blank" %}
+  {{ site.first_name }} {{ site.middle_name }} {{ site.last_name }}
+{% else %}
+  {{ site.title }}
+{% endif %}
+{% if page.title != "blank" and page.url != "/" %}
+  | {{ page.title }}
+{% endif %}
+</title>
+<meta name="description" content="{{ site.description }}">
+
+<!-- Open Graph -->
+{% if site.serve_og_meta %}
+<meta property="og:site_name" content="{{ site.description }}" />
+<meta property="og:type" content="object" />
+<meta property="og:title" content="{{ site.name }}" />
+<meta property="og:url" content="{{ page.url | prepend: site.baseurl | prepend: site.url }}" />
+<meta property="og:description" content="{{ page.title }}" />
+<meta property="og:image" content="{%- if page.og_image -%}{{ page.og_image }}{%- else -%}{{ site.og_image }}{%- endif -%}" />
+{% endif %}
+
+<!-- Bootstrap & MDB -->
+<link href="https://stackpath.bootstrapcdn.com/bootstrap/{{ site.bootstrap.version }}/css/bootstrap.min.css" rel="stylesheet" integrity="{{ site.bootstrap.integrity.css }}" crossorigin="anonymous">
+<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/mdbootstrap/{{ site.mdb.version }}/css/mdb.min.css" integrity="{{ site.mdb.integrity.css }}" crossorigin="anonymous" />
+
+<!-- Fonts & Icons -->
+<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/{{ site.fontawesome.version }}/css/all.min.css"  integrity="{{ site.fontawesome.integrity }}" crossorigin="anonymous">
+<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/academicons/{{ site.academicons.version }}/css/academicons.min.css" integrity="{{ site.academicons.integrity }}" crossorigin="anonymous">
+<link rel="stylesheet" type="text/css" href="https://fonts.googleapis.com/css?family=Roboto:300,400,500,700|Roboto+Slab:100,300,400,500,700|Material+Icons">
+
+<!-- Code Syntax Highlighting -->
+<link rel="stylesheet" href="https://gitcdn.xyz/repo/jwarby/jekyll-pygments-themes/master/{{ site.highlight_theme }}.css" />
+
+<!-- Styles -->
+{% if site.icon != empty %}
+<link rel="icon" href="data:image/svg+xml,<svg xmlns=%22http://www.w3.org/2000/svg%22 viewBox=%220 0 100 100%22><text y=%22.9em%22 font-size=%2290%22>{{ site.icon }}</text></svg>">
+{% endif %}
+<link rel="stylesheet" href="{{ '/assets/css/main.css' | relative_url }}">
+<link rel="canonical" href="{{ page.url | replace:'index.html','' | relative_url }}">
+
+<!-- JQuery -->
+{% include scripts/jquery.html %}
+
+<!-- Theming-->
+{% if site.enable_darkmode %}
+<script src="{{ '/assets/js/theme.js' | relative_url }}"></script>
+<script src="{{ '/assets/js/dark_mode.js' | relative_url }}"></script>
+{% endif %}
+
+{% if site.enable_google_analytics %}
+<!-- Global site tag (gtag.js) - Google Analytics -->
+<script async src="https://www.googletagmanager.com/gtag/js?id={{ site.google_analytics }}"></script>
+<script>
+  window.dataLayer = window.dataLayer || [];
+  function gtag() { dataLayer.push(arguments); }
+  gtag('js', new Date());
+
+  gtag('config', '{{ site.google_analytics }}');
+</script>
+{% endif %}
+
+{% if site.enable_panelbear_analytics %}
+<!-- Panelbear Analytics - We respect your privacy -->
+<script async src="https://cdn.panelbear.com/analytics.js?site={{site.panelbear_analytics}}"></script>
+<script>
+    window.panelbear = window.panelbear || function() { (window.panelbear.q = window.panelbear.q || []).push(arguments); };
+    panelbear('config', { site: '{{site.panelbear_analytics}}' });
+</script>
+{% endif %}
diff --git a/_includes/header.html b/_includes/header.html
new file mode 100644
index 0000000..31e1fd2
--- /dev/null
+++ b/_includes/header.html
@@ -0,0 +1,92 @@
+<header>
+
+    <!-- Nav Bar -->
+    <nav id="navbar" class="navbar navbar-light navbar-expand-sm {% if site.navbar_fixed %}fixed-top{% else %}sticky-top{% endif %}">
+    <div class="container">
+      {% if page.title != "about" %}
+      <a class="navbar-brand title font-weight-lighter" href="{{ site.baseurl | prepend: site.url }}/">
+       {% if site.title == "blank" %}<span class="font-weight-bold">{{ site.first_name }}</span> {{ site.middle_name }}  {{ site.last_name }}{% else %}{{ site.title }}{% endif %}
+      </a>
+      {% elsif site.enable_navbar_social %}
+        <!-- Social Icons -->
+        <div class="navbar-brand social">
+          {% include social.html %}
+        </div>
+      {% endif %}
+      <!-- Navbar Toggle -->
+      <button class="navbar-toggler collapsed ml-auto" type="button" data-toggle="collapse" data-target="#navbarNav" aria-controls="navbarNav" aria-expanded="false" aria-label="Toggle navigation">
+        <span class="sr-only">Toggle navigation</span>
+        <span class="icon-bar top-bar"></span>
+        <span class="icon-bar middle-bar"></span>
+        <span class="icon-bar bottom-bar"></span>
+      </button>
+      <div class="collapse navbar-collapse text-right" id="navbarNav">
+        <ul class="navbar-nav ml-auto flex-nowrap">
+          <!-- About -->
+          <li class="nav-item {% if page.title == 'about' %}active{% endif %}">
+            <a class="nav-link" href="{{ '/' | relative_url }}">
+              about
+              {% if page.title == "about" %}
+                <span class="sr-only">(current)</span>
+              {% endif %}
+            </a>
+          </li>
+          {% if site.blog_name %}
+          <!-- Blog -->
+          <li class="nav-item {% if page.url contains 'blog' %}active{% endif %}">
+            <a class="nav-link" href="{{ '/blog/' | relative_url }}">
+              blog
+              {% if page.title == "blog" %}
+              <span class="sr-only">(current)</span>
+              {% endif %}
+            </a>
+          </li>
+          {% endif %}
+          <!-- Other pages -->
+          {% assign sorted_pages = site.pages | sort: "title" %}
+          {% for p in sorted_pages %}
+          {% if p.nav and p.autogen == nil %}
+          {% if p.dropdown %}
+          <li class="nav-item dropdown {% if page.title == p.title %}active{% endif %}">
+              <a class="nav-link dropdown-toggle" href="#" id="navbarDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false">
+                {{ p.title }}
+                {% if page.title == p.title %}
+                <span class="sr-only">(current)</span>
+                {% endif %}
+              </a>
+              <div class="dropdown-menu dropdown-menu-right" aria-labelledby="navbarDropdown">
+              {% for child in p.children %}
+              {% if child.title == 'divider' %}
+                <div class="dropdown-divider"></div>
+              {% else %}
+                <a class="dropdown-item" href="{{ child.permalink | relative_url }}">{{ child.title }}</a>
+              {% endif %}
+              {% endfor %}
+              </div>
+          </li>
+          {% else %}
+          <li class="nav-item {% if page.title == p.title %}active{% endif %}">
+              <a class="nav-link" href="{{ p.url | relative_url }}">
+                {{ p.title }}
+                {% if page.title == p.title %}
+                <span class="sr-only">(current)</span>
+                {% endif %}
+              </a>
+          </li>
+          {% endif %}
+          {% endif %}
+          {% endfor %}
+          {% if site.enable_darkmode %}
+            <div class = "toggle-container">
+              <a id = "light-toggle">
+                  <i class="fas fa-moon"></i>
+                  <i class="fas fa-sun"></i>
+              </a>
+            </div>
+          {% endif %}
+        </ul>
+      </div>
+    </div>
+  </nav>
+
+</header>
diff --git a/_includes/news.html b/_includes/news.html
new file mode 100644
index 0000000..e1fc80b
--- /dev/null
+++ b/_includes/news.html
@@ -0,0 +1,24 @@
+<div class="news">
+  <h2>news</h2>
+  {% if site.news  %}
+    <div class="table-responsive">
+      <table class="table table-sm table-borderless">
+      {% assign news = site.news | reverse %}
+      {% for item in news limit: site.news_limit %}
+        <tr>
+          <th scope="row">{{ item.date | date: "%b %-d, %Y" }}</th>
+          <td>
+            {% if item.inline %}
+              {{ item.content | remove: '<p>' | remove: '</p>' | emojify }}
+            {% else %}
+              <a class="news-title" href="{{ item.url | relative_url }}">{{ item.title }}</a>
+            {% endif %}
+          </td>
+        </tr>
+      {% endfor %}
+      </table>
+    </div>
+  {% else %}
+    <p>No news so far...</p>
+  {% endif %}
+</div>
diff --git a/_includes/pagination.html b/_includes/pagination.html
new file mode 100644
index 0000000..6761017
--- /dev/null
+++ b/_includes/pagination.html
@@ -0,0 +1,17 @@
+{% if paginator.total_pages > 1 %}
+<nav aria-label="Blog page naviation">
+  <ul class="pagination pagination-lg justify-content-center">
+    <li class="page-item {% unless paginator.previous_page %}disabled{% endunless %}">
+      <a class="page-link" href="{{ paginator.previous_page_path | relative_url }}" tabindex="-1" aria-disabled="{{ paginator.previous_page }}">Newer</a>
+    </li>
+    {% if paginator.page_trail %}
+      {% for trail in paginator.page_trail %}
+        <li class="page-item {% if page.url == trail.path %}active{% endif %}"><a class="page-link" href="{{ trail.path | relative_url }}" title="{{trail.title}}">{{ trail.num }}</a></li>
+      {% endfor %}
+    {% endif %}
+    <li class="page-item {% unless paginator.next_page %}disabled{% endunless %}">
+      <a class="page-link" href="{{ paginator.next_page_path | relative_url }}">Older</a>
+    </li>
+  </ul>
+</nav>
+{% endif %}
diff --git a/_includes/projects.html b/_includes/projects.html
new file mode 100644
index 0000000..55a1461
--- /dev/null
+++ b/_includes/projects.html
@@ -0,0 +1,32 @@
+<div class="grid-item">
+  {% if project.redirect %}
+  <a href="{{ project.redirect }}" target="_blank">
+  {% else %}
+  <a href="{{ project.url | relative_url }}">
+  {% endif %}
+    <div class="card hoverable">
+      {% if project.img %}
+      <img src="{{ project.img | relative_url }}" alt="project thumbnail">
+      {% endif %}
+      <div class="card-body">
+        <h2 class="card-title text-lowercase">{{ project.title }}</h2>
+        <p class="card-text">{{ project.description }}</p>
+        <div class="row ml-1 mr-1 p-0">
+          {% if project.github %}
+          <div class="github-icon">
+            <div class="icon" data-toggle="tooltip" title="Code Repository">
+              <a href="{{ project.github }}" target="_blank"><i class="fab fa-github gh-icon"></i></a>
+            </div>
+            {% if project.github_stars %}
+            <span class="stars" data-toggle="tooltip" title="GitHub Stars">
+              <i class="fas fa-star"></i>
+              <span id="{{ project.github_stars }}-stars"></span>
+            </span>
+            {% endif %}
+          </div>
+          {% endif %}
+        </div>
+      </div>
+    </div>
+  </a>
+</div>
diff --git a/_includes/projects_horizontal.html b/_includes/projects_horizontal.html
new file mode 100644
index 0000000..edecb9b
--- /dev/null
+++ b/_includes/projects_horizontal.html
@@ -0,0 +1,40 @@
+<div class="card-item col">
+  {% if project.redirect %}
+  <a href="{{ project.redirect }}" target="_blank">
+  {% else %}
+  <a href="{{ project.url | relative_url }}">
+  {% endif %}
+    <div class="card hoverable">
+      <div class="row g-0">
+        {% if project.img %}
+        <div class="card-img col-md-6">
+          <img src="{{ project.img | relative_url }}" alt="project thumbnail">
+        </div>
+        <div class="col-md-6">
+        {% else %}
+        <div class="col-md-12">
+        {% endif %}
+          <div class="card-body">
+            <h3 class="card-title text-lowercase">{{ project.title }}</h3>
+            <p class="card-text">{{ project.description }}</p>
+            <div class="row ml-1 mr-1 p-0">
+              {% if project.github %}
+              <div class="github-icon">
+                <div class="icon" data-toggle="tooltip" title="Code Repository">
+                  <a href="{{ project.github }}" target="_blank"><i class="fab fa-github gh-icon"></i></a>
+                </div>
+                {% if project.github_stars %}
+                <span class="stars" data-toggle="tooltip" title="GitHub Stars">
+                  <i class="fas fa-star"></i>
+                  <span id="{{ project.github_stars }}-stars"></span>
+                </span>
+                {% endif %}
+              </div>
+              {% endif %}
+            </div>
+          </div>
+        </div>
+      </div>
+    </div>
+  </a>
+</div>
diff --git a/_includes/scripts/bootstrap.html b/_includes/scripts/bootstrap.html
new file mode 100644
index 0000000..2c5d4ee
--- /dev/null
+++ b/_includes/scripts/bootstrap.html
@@ -0,0 +1,4 @@
+<!-- Bootsrap & MDB scripts -->
+<script src="https://cdnjs.cloudflare.com/ajax/libs/popper.js/{{ site.popper.version }}/umd/popper.min.js" integrity="{{ site.popper.integrity }}" crossorigin="anonymous"></script>
+<script src="https://stackpath.bootstrapcdn.com/bootstrap/{{ site.bootstrap.version }}/js/bootstrap.min.js" integrity="{{ site.bootstrap.integrity.js }}" crossorigin="anonymous"></script>
+<script src="https://cdnjs.cloudflare.com/ajax/libs/mdbootstrap/{{ site.mdb.version }}/js/mdb.min.js" integrity="{{ site.mdb.integrity.js }}" crossorigin="anonymous"></script>
diff --git a/_includes/scripts/jquery.html b/_includes/scripts/jquery.html
new file mode 100644
index 0000000..8de7788
--- /dev/null
+++ b/_includes/scripts/jquery.html
@@ -0,0 +1,2 @@
+<!-- jQuery -->
+<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/{{ site.jquery.version }}/jquery.min.js" integrity="{{ site.jquery.integrity }}" crossorigin="anonymous"></script>
diff --git a/_includes/scripts/mansory.html b/_includes/scripts/mansory.html
new file mode 100644
index 0000000..5a93a9e
--- /dev/null
+++ b/_includes/scripts/mansory.html
@@ -0,0 +1,6 @@
+{% if site.enable_mansory %}
+<!-- Mansory & imagesLoaded -->
+<script defer src="https://unpkg.com/masonry-layout@4/dist/masonry.pkgd.min.js"></script>
+<script defer src="https://unpkg.com/imagesloaded@4/imagesloaded.pkgd.min.js"></script>
+<script defer src="{{ '/assets/js/mansory.js' | relative_url }}" type="text/javascript"></script>
+{% endif %}
diff --git a/_includes/scripts/mathjax.html b/_includes/scripts/mathjax.html
new file mode 100644
index 0000000..53db9e0
--- /dev/null
+++ b/_includes/scripts/mathjax.html
@@ -0,0 +1,12 @@
+{% if site.enable_math %}
+<!-- MathJax -->
+<script type="text/javascript">
+  window.MathJax = {
+    tex: {
+      tags: 'ams'
+    }
+  };
+</script>
+<script defer type="text/javascript" id="MathJax-script" src="https://cdn.jsdelivr.net/npm/mathjax@{{ site.mathjax.version }}/es5/tex-mml-chtml.js"></script>
+<script defer src="https://polyfill.io/v3/polyfill.min.js?features=es6"></script>
+{% endif %}
diff --git a/_includes/scripts/misc.html b/_includes/scripts/misc.html
new file mode 100644
index 0000000..260ce1b
--- /dev/null
+++ b/_includes/scripts/misc.html
@@ -0,0 +1,15 @@
+{% if site.enable_tooltips %}
+<!-- Enable Tooltips -->
+<script type="text/javascript">
+$(function () {$('[data-toggle="tooltip"]').tooltip()})
+</script>
+{% endif %}
+
+{% if site.enable_medium_zoom %}
+<!-- Medium Zoom JS -->
+<script src="https://cdn.jsdelivr.net/npm/medium-zoom@{{ site.medium_zoom.version }}/dist/medium-zoom.min.js" integrity="{{ site.medium_zoom.integrity }}" crossorigin="anonymous"></script>
+<script src="{{ '/assets/js/zoom.js' | relative_url }}"></script>
+{% endif %}
+
+<!-- Load Common JS -->
+<script src="{{ '/assets/js/common.js' | relative_url }}"></script>
diff --git a/_includes/selected_papers.html b/_includes/selected_papers.html
new file mode 100644
index 0000000..0093c87
--- /dev/null
+++ b/_includes/selected_papers.html
@@ -0,0 +1,4 @@
+<div class="publications">
+  <h2>selected publications</h2>
+  {% bibliography -f papers -q @*[selected=true]* %}
+</div>
diff --git a/_includes/social.html b/_includes/social.html
new file mode 100644
index 0000000..c783058
--- /dev/null
+++ b/_includes/social.html
@@ -0,0 +1,17 @@
+{% if site.email %}<a href="mailto:{{ site.email | encode_email }}"><i class="fas fa-envelope"></i></a>{% endif %}
+{% if site.orcid_id %}<a href="https://orcid.org/{{ site.orcid_id }}" target="_blank" title="ORCID"><i class="ai ai-orcid"></i></a>{% endif %}
+{% if site.scholar_userid %}<a href="https://scholar.google.com/citations?user={{ site.scholar_userid }}" target="_blank" title="Google Scholar"><i class="ai ai-google-scholar"></i></a>{% endif %}
+{% if site.publons_id %}<a href="https://publons.com/a/{{ site.publons_id }}/" target="_blank" title="Publons"><i class="ai ai-publons"></i></a>{% endif %}
+{% if site.research_gate_profile %}<a href="https://www.researchgate.net/profile/{{site.research_gate_profile}}/" target="_blank" title="ResearchGate"><i class="ai ai-researchgate"></i></a>{% endif %}
+{% if site.github_username %}<a href="https://github.com/{{ site.github_username }}" target="_blank" title="GitHub"><i class="fab fa-github"></i></a>{% endif %}
+{% if site.linkedin_username %}<a href="https://www.linkedin.com/in/{{ site.linkedin_username }}" target="_blank" title="LinkedIn"><i class="fab fa-linkedin"></i></a>{% endif %}
+{% if site.twitter_username %}<a href="https://twitter.com/{{ site.twitter_username }}" target="_blank" title="Twitter"><i class="fab fa-twitter"></i></a>{% endif %}
+{% if site.medium_username %}<a href="https://medium.com/@{{ site.medium_username }}" target="_blank" title="Medium"><i class="fab fa-medium"></i></a>{% endif %}
+{% if site.quora_username %}<a href="https://www.quora.com/profile/{{ site.quora_username }}" target="_blank" title="Quora"><i class="fab fa-quora"></i></a>{% endif %}
+{% if site.blogger_url %}<a href="{{ site.blogger_url }}" target="_blank" title="Blogger"><i class="fab fa-blogger-b"></i></a>{% endif %}
+{% if site.work_url %}<a href="{{ site.work_url }}" target="_blank" title="Work"><i class="fas fa-briefcase"></i></a>{% endif %}
+{% if site.wikidata_id %}<a href="https://www.wikidata.org/wiki/{{ site.wikidata_id }}" target="_blank" title="Wikidata"><i class="fas fa-barcode"></i></a>{% endif %}
+{% if site.strava_userid %}<a href="https://www.strava.com/athletes/{{ site.strava_userid }}" target="_blank" title="Strava"><i class="fab fa-strava"></i></a>{% endif %}
+{% if site.keybase_username %}<a href="https://keybase.io/{{ site.keybase_username }}" target="_blank" title="Keybase"><i class="fab fa-keybase"></i></a>{% endif %}
+{% if site.gitlab_username %}<a href="https://gitlab.com/{{ site.gitlab_username }}" target="_blank" title="GitLab"><i class="fab fa-gitlab"></i></a>{% endif %}
+{% if site.dblp_url %}<a href="{{ site.dblp_url }}" target="_blank" title="DBLP"><i class="ai ai-dblp"></i></a>{% endif %}
-- 
cgit v1.2.3